@roo Thanks for the reports, it seems there is something strange going on here.
When multiple issues like that appear, it might be that there is something invisible broken in the code, which prevents some of the processing of the game.
Would you mind sending me the save, so I can investigate it?
Here is a tutorial: How to find your screenshots and savegames
Also, make sure you don’t overwrite all of your saves of this colony in case one of the saves might be corrupted.